Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52716.1Hypothetical protein; IMG reference gene:2504774281. (43 aa)    
Predicted Functional Partners:
AEE52715.1
KEGG: aas:Aasi_0597 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774280.
       0.578
AEE52717.1
KEGG: lby:Lbys_0288 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774282.
       0.541
AEE52714.1
Protein of unknown function DUF423; COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: rmr:Rmar_2261 protein of unknown function DUF423; PFAM: Protein of unknown function DUF423; SPTR: Putative uncharacterized protein; IMG reference gene:2504774279; PFAM: Protein of unknown function (DUF423).
       0.435
AEE52718.1
Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR011110:IPR011123:IPR003661:IPR003594:IPR 001789:IPR000005:IPR018060; KEGG: cpi:Cpin_6165 histidine kinase; PFAM: ATP-binding region, ATPase-like; Two component regulator three Y; Two component regulator propeller; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; Helix-turn-helix, AraC type; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidi [...]
       0.402
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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