Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52717.1KEGG: lby:Lbys_0288 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774282. (148 aa)    
Predicted Functional Partners:
AEE52718.1
Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR011110:IPR011123:IPR003661:IPR003594:IPR 001789:IPR000005:IPR018060; KEGG: cpi:Cpin_6165 histidine kinase; PFAM: ATP-binding region, ATPase-like; Two component regulator three Y; Two component regulator propeller; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; Helix-turn-helix, AraC type; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidi [...]
 
     0.609
AEE52716.1
Hypothetical protein; IMG reference gene:2504774281.
       0.541
AEE52715.1
KEGG: aas:Aasi_0597 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774280.
 
     0.492
AEE49465.1
Hypothetical protein; COGs: COG0308 Aminopeptidase N; KEGG: sli:Slin_4874 hypothetical protein; SPTR: Membrane protein; IMG reference gene:2504770934; PFAM: Peptidase family M1.
  
     0.463
AEE50234.1
InterPro IPR000627; KEGG: lby:Lbys_0962 intradiol ring-cleavage dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; SPTR: Intradiol ring-cleavage dioxygenase; IMG reference gene:2504771726; PFAM: Dioxygenase.
  
     0.418
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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