STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AEE52731.1TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: cpi:Cpin_6166 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative uncharacterized protein; IMG reference gene:2504774297; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family. (981 aa)    
Predicted Functional Partners:
AEE52730.1
InterPro IPR012944; KEGG: cpi:Cpin_5091 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504774296; PFAM: SusD family.
 
   
 0.934
AEE48302.1
KEGG: cpi:Cpin_5090 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769746.
 
 
   0.792
AEE48301.1
InterPro IPR012944; KEGG: cpi:Cpin_5091 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504769745; PFAM: SusD family.
 
   
 0.786
AEE52729.1
KEGG: pdi:BDI_1560 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774295.
 
 
   0.783
AEE49350.1
InterPro IPR012944; KEGG: lby:Lbys_0834 ragb/susd domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504770817; PFAM: SusD family.
  
     0.737
AEE53661.1
InterPro IPR012944; KEGG: sli:Slin_4041 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504775236; PFAM: SusD family.
  
     0.737
AEE49017.1
InterPro IPR012944; KEGG: sli:Slin_6054 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504770480; PFAM: SusD family.
  
     0.729
AEE52499.1
InterPro IPR012944; KEGG: dfe:Dfer_1619 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504774056; PFAM: SusD family.
  
     0.700
AEE49406.1
RagB/SusD domain-containing protein; InterPro IPR012944; KEGG: fbc:FB2170_08154 putative outer membrane protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein; IMG reference gene:2504770875; PFAM: SusD family.
  
     0.689
AEE54024.1
Cyclomaltodextrin glucanotransferase; COGs: COG0366 Glycosidase; InterPro IPR015171:IPR006047:IPR019492:IPR006589; KEGG: gfo:GFO_2133 alpha amylase; PFAM: Glycosyl hydrolase, family 13, catalytic region; Cyclomaltodextrinase, N-terminal; Cyclo-malto-dextrinase, C-terminal; PRIAM: Cyclomaltodextrin glucanotransferase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Alpha amylase; IMG reference gene:2504775610; PFAM: Cyclomaltodextrinase, N-terminal; Alpha amylase, catalytic domain; Cyclo-malto-dextrinase C-terminal domain.
  
     0.681
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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