STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE52737.1Hypothetical protein; IMG reference gene:2504774303. (398 aa)    
Predicted Functional Partners:
AEE52738.1
Hypothetical protein; IMG reference gene:2504774304.
       0.709
AEE52739.1
Hypothetical protein; IMG reference gene:2504774305.
       0.685
AEE52740.1
Hypothetical protein; IMG reference gene:2504774306.
       0.685
AEE52741.1
Putative two component, sigma54 specific, transcriptional regulator; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR003593; KEGG: ctc:CTC02322 transcriptional response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; SMART: ATPase, AAA+ type, core; Signal transduction response regulator, receiver region; SPTR: Transcriptional response regulator; IMG reference gene:2504774307; PFAM: Response regulator receiver domain; Sigma-54 int [...]
       0.685
AEE52742.1
Hypothetical protein; IMG reference gene:2504774308.
       0.603
AEE52736.1
Hypothetical protein; IMG reference gene:2504774302.
       0.535
AEE50361.1
Squalene/phytoene synthase; COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR002060; KEGG: mtt:Ftrac_1471 phytoene synthase; PFAM: Squalene/phytoene synthase; SPTR: Phytoene synthase; IMG reference gene:2504771857; PFAM: Squalene/phytoene synthase.
  
 
 0.481
AEE52950.1
Exonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
  
  
 0.425
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 
 0.405
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.