Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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AEE52747.1GumN family protein; COGs: COG3735 conserved hypothetical protein; InterPro IPR010891; KEGG: dfe:Dfer_3396 GumN family protein; PFAM: GumN; SPTR: GumN family protein; IMG reference gene:2504774313; PFAM: GumN protein. (296 aa)    
Predicted Functional Partners:
AEE52746.1
InterPro IPR004197:IPR001701; KEGG: dfe:Dfer_5683 cellulose 1,4-beta-cellobiosidase; PFAM: Glycoside hydrolase, family 9; Glycoside hydrolase, family 9, N-terminal, Ig-like; PRIAM: Cellulose 1,4-beta-cellobiosidase; SPTR: Cellulose 1,4-beta-cellobiosidase; IMG reference gene:2504774312; PFAM: Glycosyl hydrolase family 9; N-terminal ig-like domain of cellulase.
 
     0.645
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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