Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52765.1InterPro IPR002559; KEGG: amr:AM1_3283 IS4 family transposase; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family; IMG reference gene:2504774332; PFAM: Transposase DDE domain. (326 aa)    
Predicted Functional Partners:
AEE52764.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: rmr:Rmar_2599 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family, putative; IMG reference gene:2504774331; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
       0.536
AEE52766.1
COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469:IPR001375; KEGG: swp:swp_4414 peptidase S9, prolyl oligopeptidase active site region:peptidase S9B, dipeptidylpeptidase IV; SPTR: Dipeptidyl peptidase IV; IMG reference gene:2504774333; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region.
       0.472
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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