Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEE52771.1KEGG: dfe:Dfer_1870 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774338. (190 aa)    
Predicted Functional Partners:
AEE52770.1
InterPro IPR000073; KEGG: dfe:Dfer_1871 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase fold protein; IMG reference gene:2504774337; PFAM: alpha/beta hydrolase fold.
       0.773
AEE52769.1
TonB family protein; InterPro IPR003538:IPR006260; KEGG: mtt:Ftrac_2315 TonB family protein; PFAM: Gram-negative bacterial tonB protein; SPTR: TonB protein; TIGRFAM: TonB, C-terminal; IMG reference gene:2504774336; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
       0.538
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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