Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE52775.1Hypothetical protein; IMG reference gene:2504774342. (32 aa)    
Predicted Functional Partners:
AEE52774.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774341.
       0.773
AEE52773.1
Hypothetical protein; InterPro IPR006311; KEGG: sli:Slin_1890 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774340.
       0.461
AEE52776.1
DoxX family protein; InterPro IPR011637; KEGG: sli:Slin_0983 DoxX family protein; PFAM: DoxX; SPTR: DoxX family protein; IMG reference gene:2504774343; PFAM: DoxX.
       0.443
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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