Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52776.1DoxX family protein; InterPro IPR011637; KEGG: sli:Slin_0983 DoxX family protein; PFAM: DoxX; SPTR: DoxX family protein; IMG reference gene:2504774343; PFAM: DoxX. (138 aa)    
Predicted Functional Partners:
AEE51632.1
InterPro IPR011600; KEGG: peptidase C14 caspase catalytic subunit P20; PFAM: Peptidase C14, caspase catalytic; SPTR: Putative uncharacterized protein; IMG reference gene:2504773164; PFAM: Caspase domain.
  
     0.719
AEE49301.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104:IPR006311; KEGG: pdi:BDI_1870 putative dehydrogenase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Putative dehydrogenase; IMG reference gene:2504770767; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
     0.652
AEE48461.1
Ethyl tert-butyl ether degradation EthD; InterPro IPR009799; KEGG: fbc:FB2170_11056 hypothetical protein; PFAM: Ethyl tert-butyl ether degradation EthD; SPTR: Putative uncharacterized protein; TIGRFAM: Ethyl tert-butyl ether degradation EthD; IMG reference gene:2504769907; PFAM: EthD protein; TIGRFAM: conserved hypothetical protein.
  
     0.540
AEE51782.1
KEGG: dfe:Dfer_4982 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773318; PFAM: Predicted nucleotide-binding protein, containing PIN domain.
  
     0.513
AEE50306.1
KEGG: mtt:Ftrac_2067 phosphoribosylpyrophosphate synthetase; SPTR: Phosphoribosylpyrophosphate synthetase; IMG reference gene:2504771801.
  
     0.498
AEE50225.1
Methionine sulfoxide reductase A; InterPro IPR002569; KEGG: sal:Sala_0088 hypothetical protein; PFAM: Peptide methionine sulphoxide reductase MsrA; SPTR: Putative uncharacterized protein; IMG reference gene:2504771717; PFAM: Peptide methionine sulfoxide reductase.
 
    0.497
AEE52345.1
Peptidase C1A papain; COGs: COG4870 Cysteine protease; InterPro IPR000668; KEGG: sit:TM1040_0842 peptidase C1A, papain; PFAM: Peptidase C1A, papain C-terminal; SMART: Peptidase C1A, papain C-terminal; SPTR: Peptidase C1A, papain; IMG reference gene:2504773892; PFAM: Papain family cysteine protease.
  
     0.496
AEE50601.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: dfe:Dfer_0351 XRE family plasmid maintenance system antidote protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Plasmid maintenance system antidote protein, XRE family; IMG reference gene:2504772104; PFAM: Helix-turn-helix.
  
     0.491
AEE48657.1
Glycoside hydrolase family 2 sugar binding protein; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104:IPR006103; KEGG: gym:GYMC10_0218 glycoside hydrolase family 2 sugar binding protein; PFAM: Glycoside hydrolase family 2, carbohydrate-binding; Glycoside hydrolase family 2, TIM barrel; SPTR: Glycoside hydrolase family 2 sugar binding protein; IMG reference gene:2504770108; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
  
  
  0.463
AEE52464.1
InterPro IPR012944; KEGG: sli:Slin_0022 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504774020; PFAM: SusD family.
  
     0.453
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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