STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE52780.1COGs: COG4952 sugar isomerase; InterPro IPR012307; KEGG: dfe:Dfer_4611 xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Sugar isomerase; IMG reference gene:2504774347; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: L-rhamnose catabolism isomerase, Pseudomonas stutzeri subtype. (426 aa)    
Predicted Functional Partners:
AEE52779.1
Carbohydrate kinase, FGGY; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484; KEGG: dfe:Dfer_4893 carbohydrate kinase FGGY; PFAM: Carbohydrate kinase, FGGY, N-terminal; SPTR: Carbohydrate kinase FGGY; IMG reference gene:2504774346; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain.
 
   
 0.952
AEE49044.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; COGs: COG3347 conserved hypothetical protein; InterPro IPR001303:IPR002198:IPR013454; KEGG: sli:Slin_1802 rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; Class II aldolase/adducin, N-terminal; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; TIGRFAM: Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; IMG reference gene:2504770507; PFAM: Class II Aldolase and Adducin N-terminal domain; short chain deh [...]
 
     0.815
AEE52202.1
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
 
   
 0.667
AEE54013.1
Hypothetical protein; COGs: COG1457 Purine-cytosine permease and related protein; KEGG: rbi:RB2501_00936 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775599.
 
     0.550
AEE49043.1
Transcriptional regulator, GntR family; COGs: COG1725 transcriptional regulator protein; InterPro IPR000524; KEGG: sli:Slin_3237 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family; IMG reference gene:2504770506; PFAM: Bacterial regulatory proteins, gntR family.
 
     0.503
AEE52781.1
Sodium/hydrogen exchanger; COGs: COG3263 NhaP-type Na+/H+ and K+/H+ antiporter with a unique C-terminal domain; InterPro IPR006153; KEGG: rci:RRC456 putative Na(+)/H(+) antiporter; PFAM: Cation/H+ exchanger; SPTR: Putative Na(+)/H(+) antiporter; IMG reference gene:2504774348; PFAM: Sodium/hydrogen exchanger family.
       0.501
AEE52203.1
KEGG: dfe:Dfer_3461 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773746.
 
     0.431
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.