Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE52782.1Domain of unknown function DUF1801; InterPro IPR014922; KEGG: lby:Lbys_0952 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: Putative uncharacterized protein; IMG reference gene:2504774349; PFAM: Domain of unknown function (DU1801). (147 aa)    
Predicted Functional Partners:
AEE52783.1
KEGG: dfe:Dfer_5337 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774350.
       0.516
AEE51617.1
KEGG: rbi:RB2501_14459 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773146; PFAM: Protein of unknown function (DUF2911).
  
     0.499
AEE50449.1
KEGG: fbc:FB2170_08854 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771950; PFAM: Protein of unknown function (DUF664).
  
     0.439
AEE53235.1
InterPro IPR013105:IPR019734; KEGG: fbc:FB2170_05425 hypothetical protein; PFAM: Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein; IMG reference gene:2504774808; PFAM: Tetratricopeptide repeat.
  
     0.425
AEE52808.1
Hypothetical protein; IMG reference gene:2504774375.
  
     0.408
AEE52784.1
Hypothetical protein; IMG reference gene:2504774351.
       0.407
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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