Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52783.1KEGG: dfe:Dfer_5337 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774350. (268 aa)    
Predicted Functional Partners:
AEE52784.1
Hypothetical protein; IMG reference gene:2504774351.
       0.592
AEE50159.1
InterPro IPR013428:IPR013427; KEGG: dfe:Dfer_3707 membrane-bound dehydrogenase domain protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: Putative membrane-bound dehydrogenase; Putative haem-binding region; IMG reference gene:2504771648; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type.
  
     0.586
AEE49195.1
InterPro IPR003088; KEGG: fbc:FB2170_14653 hypothetical protein; PFAM: Cytochrome c, class I; SPTR: Probable large, multifunctional secreted protein; IMG reference gene:2504770661; PFAM: Cytochrome c.
  
     0.555
AEE52782.1
Domain of unknown function DUF1801; InterPro IPR014922; KEGG: lby:Lbys_0952 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: Putative uncharacterized protein; IMG reference gene:2504774349; PFAM: Domain of unknown function (DU1801).
       0.516
AEE48011.1
Membrane-bound dehydrogenase domain protein; InterPro IPR003088:IPR013428:IPR013427; KEGG: dfe:Dfer_0279 membrane-bound dehydrogenase domain protein; PFAM: Cytochrome c, class I; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: Putative membrane-bound dehydrogenase; Putative haem-binding region; IMG reference gene:2504769448; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type.
  
     0.510
AEE50092.1
Hypothetical protein; KEGG: dfe:Dfer_4983 signal peptide and transmembrane prediction; SPTR: Signal peptide and transmembrane prediction; IMG reference gene:2504771577; PFAM: Trehalose utilisation.
  
     0.400
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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