Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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AEE52786.1Protein of unknown function DUF132; InterPro IPR006596:IPR002850; KEGG: fsu:Fisuc_0956 PilT protein domain protein; SMART: Nucleotide binding protein, PINc; SPTR: Nucleic acid-binding protein, contains PIN domain; TIGRFAM: Protein of unknown function DUF132; IMG reference gene:2504774353; TIGRFAM: putative toxin-antitoxin system toxin component, PIN family. (135 aa)    
Predicted Functional Partners:
AEE52787.1
KEGG: sli:Slin_2418 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774354.
       0.781
AEE50932.1
KEGG: sli:Slin_5909 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772449; PFAM: Protein of unknown function DUF82.
  
   
 0.613
AEE48642.1
COGs: COG1487 nucleic acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: dfe:Dfer_4420 PilT protein domain protein; PFAM: PilT protein, N-terminal; SPTR: PilT protein domain protein; IMG reference gene:2504770092; PFAM: PIN domain.
  
     0.599
vapC
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.583
AEE52788.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: dfe:Dfer_4524 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component system response regulator protein; IMG reference gene:2504774355; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
       0.580
AEE54076.1
InterPro IPR001087; KEGG: sli:Slin_3845 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family; IMG reference gene:2504775663; PFAM: GDSL-like Lipase/Acylhydrolase.
  
     0.545
AEE48762.1
KEGG: dfe:Dfer_1169 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770217.
  
     0.518
AEE48695.1
KEGG: sli:Slin_1654 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770148.
  
     0.513
AEE51927.1
InterPro IPR008538; KEGG: sli:Slin_0255 protein of unknown function DUF820; PFAM: Protein of unknown function DUF820; SPTR: Putative uncharacterized protein; IMG reference gene:2504773465; PFAM: Protein of unknown function (DUF820).
  
     0.506
vapC-3
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.487
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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