Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52802.1KEGG: chu:CHU_2313 rifampin ADP-ribosylating transferase; SPTR: Rifampin ADP-ribosylating transferase; IMG reference gene:2504774369; PFAM: DNA/RNA tunnel of bacterial DNA dependent RNA polymerase. (147 aa)    
Predicted Functional Partners:
AEE48609.1
KEGG: cyj:Cyan7822_6599 rifampin ADP-ribosyl transferase; SPTR: Putative rifampin ADP-ribosyl transferase; IMG reference gene:2504770059.
 
      0.899
AEE52801.1
COGs: COG4898 conserved hypothetical protein; InterPro IPR014580; KEGG: chu:CHU_2319 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033199; SPTR: Putative uncharacterized protein; IMG reference gene:2504774368; PFAM: Uncharacterized protein conserved in bacteria (DUF2200).
       0.714
AEE52800.1
N-acetylgalactosamine-6-sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: ava:Ava_4240 twin-arginine translocation pathway signal; PFAM: Sulfatase; PRIAM: N-acetylgalactosamine-6-sulfatase; SPTR: Twin-arginine translocation pathway signal; IMG reference gene:2504774367; PFAM: Sulfatase.
       0.595
AEE52803.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: sus:Acid_6249 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; IMG reference gene:2504774370; PFAM: Beta-lactamase.
       0.578
AEE52804.1
KEGG: sli:Slin_2878 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774371.
 
     0.472
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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