Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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AEE52806.1Putative transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: chu:CHU_0226 cyclic nucleotide binding regulatory protein; PFAM: Cyclic nucleotide-binding; SPTR: Cyclic nucleotide binding regulatory protein; IMG reference gene:2504774373; PFAM: Cyclic nucleotide-binding domain. (187 aa)    
Predicted Functional Partners:
AEE52804.1
KEGG: sli:Slin_2878 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774371.
 
     0.715
AEE52807.1
KEGG: fba:FIC_00905 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774374.
       0.709
AEE52808.1
Hypothetical protein; IMG reference gene:2504774375.
 
     0.669
AEE52809.1
Hypothetical protein; COGs: COG0308 Aminopeptidase N; KEGG: gau:GAU_2558 hypothetical protein; SPTR: Putative aminopeptidase; IMG reference gene:2504774376.
   
   0.581
AEE52805.1
KEGG: sli:Slin_2879 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774372.
       0.547
AEE50888.1
Adenylate/guanylate cyclase with TPR repeats; COGs: COG3899 ATPase; InterPro IPR019734:IPR001054:IPR001440:IPR013105; KEGG: scl:sce9151 guanylate cyclase; PFAM: Tetratricopeptide TPR2; Adenylyl cyclase class-3/4/guanylyl cyclase; Tetratricopeptide TPR-1; SPTR: Guanylate cyclase; IMG reference gene:2504772399; PFAM: Adenylate and Guanylate cyclase catalytic domain; Tetratricopeptide repeat.
  
 0.545
AEE48865.1
KEGG: lby:Lbys_3464 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770324.
  
     0.537
AEE54099.1
KEGG: fps:FP1584 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775686; PFAM: Protein of unknown function (DUF1569).
  
     0.458
AEE48911.1
COGs: COG5635 NTPase (NACHT family); KEGG: ckr:CKR_1736 hypothetical protein; SPTR: Putative signal transduction protein with Nacht domain; IMG reference gene:2504770372; PFAM: NACHT domain.
  
     0.440
AEE51526.1
Helix-turn-helix domain-containing protein AraC type; InterPro IPR018060:IPR000005; KEGG: sli:Slin_3167 response regulator receiver protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Regulatory helix-turn-helix protein, AraC family; IMG reference gene:2504773055; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
  
    0.424
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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