close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE52830.1COGs: COG3485 Protocatechuate 3 4-dioxygenase beta subunit; InterPro IPR000627:IPR012786; KEGG: vap:Vapar_4465 protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; PRIAM: Protocatechuate 3,4-dioxygenase; SPTR: Protocatechuate 3,4-dioxygenase, alpha subunit; TIGRFAM: Protocatechuate 3,4-dioxygenase, alpha subunit; IMG reference gene:2504774397. (196 aa)    
Predicted Functional Partners:
AEE52831.1
COGs: COG3485 Protocatechuate 3 4-dioxygenase beta subunit; InterPro IPR000627:IPR012785; KEGG: sli:Slin_1538 protocatechuate 3,4-dioxygenase, beta subunit; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; PRIAM: Protocatechuate 3,4-dioxygenase; SPTR: Protocatechuate 3,4-dioxygenase, beta subunit; TIGRFAM: Protocatechuate 3,4-dioxygenase, beta subunit; IMG reference gene:2504774398; PFAM: Protocatechuate 3,4-dioxygenase beta subunit N terminal; Dioxygenase; TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit.
 
  
  0.994
AEE52833.1
4-hydroxybenzoate 3-monooxygenase; COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR002938; KEGG: sli:Slin_1534 4-hydroxybenzoate 3-monooxygenase; PFAM: Monooxygenase, FAD-binding; PRIAM: 4-hydroxybenzoate 3-monooxygenase; SPTR: 4-hydroxybenzoate 3-monooxygenase; IMG reference gene:2504774400; PFAM: FAD binding domain; TIGRFAM: 4-hydroxybenzoate 3-monooxygenase.
 
 
 0.994
AEE52827.1
3-carboxy-cis,cis-muconate cycloisomerase; COGs: COG0015 Adenylosuccinate lyase; InterPro IPR000362:IPR019468:IPR012789; KEGG: avn:Avin_38190 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: Fumarate lyase; Adenylosuccinate lyase, C-terminal; PRIAM: 3-carboxy-cis,cis-muconate cycloisomerase; SPTR: 3-carboxy-cis,cis-muconate cycloisomerase; TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase; IMG reference gene:2504774394; PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.984
AEE52832.1
3-oxoadipate enol-lactonase; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073:IPR003779:IPR012790:IPR012788; KEGG: azc:AZC_1444 beta-ketoadipate enol-lactone hydrolase protein; PFAM: Carboxymuconolactone decarboxylase; Alpha/beta hydrolase fold-1; PRIAM: 3-oxoadipate enol-lactonase., 4-carboxymuconolactone decarboxylase; SPTR: Beta-ketoadipate enol-lactone hydrolase protein; TIGRFAM: 3-oxoadipate enol-lactonase; 4-carboxymuconolactone decarboxylase; IMG reference gene:2504774399; PFAM: Ndr family; Carboxymuconolactone decarboxylase famil [...]
 
  
 0.953
AEE50234.1
InterPro IPR000627; KEGG: lby:Lbys_0962 intradiol ring-cleavage dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; SPTR: Intradiol ring-cleavage dioxygenase; IMG reference gene:2504771726; PFAM: Dioxygenase.
     
  0.900
AEE52829.1
COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR004165:IPR012792:IPR012791; KEGG: sli:Slin_1533 3-oxoacid CoA-transferase, B subunit; PFAM: Coenzyme A transferase; PRIAM: 3-oxoacid CoA-transferase; SPTR: 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; 3-oxoacid CoA-transferase, subunit A; IMG reference gene:2504774396; PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; 3-oxoacid CoA-transferase, A subunit.
 
  
 0.832
AEE52258.1
Intradiol ring-cleavage dioxygenase; COGs: COG3485 Protocatechuate 3 4-dioxygenase beta subunit; InterPro IPR000627; KEGG: pol:Bpro_1824 twin-arginine translocation pathway signal; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; SPTR: Catechol dioxygenase; IMG reference gene:2504773802; PFAM: Dioxygenase.
  
     0.751
AEE48381.1
COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: sli:Slin_1557 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2; IMG reference gene:2504769827; PFAM: Amidohydrolase.
  
     0.682
AEE48377.1
FAD dependent oxidoreductase; COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR006076; KEGG: sli:Slin_0336 monooxygenase FAD-binding protein; PFAM: FAD dependent oxidoreductase; SPTR: Monooxygenase FAD-binding protein; IMG reference gene:2504769823; PFAM: FAD binding domain.
 
  
 0.568
AEE48374.1
KEGG: sli:Slin_1558 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769820.
  
     0.567
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.