Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52905.1KEGG: cpi:Cpin_6394 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774477; PFAM: Planctomycete cytochrome C. (248 aa)    
Predicted Functional Partners:
AEE47924.1
COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883:IPR003468:IPR004677; KEGG: mtt:Ftrac_1616 cytochrome c oxidase, cbb3-type, subunit I; PFAM: Cytochrome C oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Cytochrome c oxidase, cbb3-type; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome C oxidase, monohaem subunit/FixO; IMG reference gene:2504769359; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; [...]
  
 
 0.926
AEE52700.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006311:IPR001450; KEGG: mtt:Ftrac_3687 quinol:cytochrome c oxidoreductase iron-sulfur protein precursor; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Quinol:cytochrome c oxidoreductase iron-sulfur protein; IMG reference gene:2504774265.
  
 
 0.848
AEE51882.1
KEGG: rmr:Rmar_0282 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773419.
  
     0.704
AEE51881.1
TonB-dependent receptor; InterPro IPR012910:IPR000531; KEGG: rmr:Rmar_2819 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; IMG reference gene:2504773418; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.655
AEE52904.1
Hypothetical protein; IMG reference gene:2504774476; PFAM: Protein of unknown function (DUF2874).
       0.651
AEE53153.1
NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR011538:IPR019554:IPR019575; KEGG: pub:SAR11_0680 NAD-dependent formate dehydrogenase subunit beta; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: NAD-dependent formate dehydrogenase beta subunit; IMG reference gene:2504774726; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase [...]
   
 
 0.644
AEE54317.1
InterPro IPR017941; KEGG: sli:Slin_1751 Rieske (2Fe-2S) iron-sulphur domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Rieske (2Fe-2S) iron-sulfur domain protein; IMG reference gene:2504775910; PFAM: Rieske [2Fe-2S] domain.
  
 
 0.610
AEE48105.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: srm:SRM_02396 putative outer membrane protein probably involved in nutrient binding; PFAM: TonB-dependent receptor, plug; SPTR: Putative TonB dependent receptor; IMG reference gene:2504769544; PFAM: TonB-dependent Receptor Plug Domain.
  
     0.605
AEE50240.1
InterPro IPR001258; KEGG: nhl repeat containing protein; PFAM: NHL repeat; SPTR: Similar to peptidylglycine monooxygenase; IMG reference gene:2504771732.
  
   0.571
AEE51496.1
KEGG: cpi:Cpin_0419 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773025.
  
     0.564
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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