Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52913.1COGs: COG3608 deacylase; InterPro IPR007036; KEGG: mtt:Ftrac_0333 succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; SPTR: Succinylglutamate desuccinylase/aspartoacylase; IMG reference gene:2504774485; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family. (335 aa)    
Predicted Functional Partners:
AEE52914.1
alpha-L-glutamate ligase, RimK family; COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR013651:IPR004666; KEGG: cyh:Cyan8802_0619 alpha-L-glutamate ligase, RimK family; PFAM: ATP-grasp fold, RimK-type; SPTR: Ribosomal protein S6 modification protein; TIGRFAM: S6 modification enzyme RimK; IMG reference gene:2504774486; PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; Belongs to the RimK family.
 
     0.935
AEE52915.1
KEGG: mtt:Ftrac_2002 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774487.
       0.464
AEE52912.1
KEGG: cpi:Cpin_5261 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774484.
       0.431
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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