STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE54090.1Glycosyl hydrolase BNR repeat-containing protein; InterPro IPR002860; KEGG: dfe:Dfer_3517 putative O-antigen related protein; PFAM: BNR repeat; SPTR: Putative O-antigen related protein; IMG reference gene:2504775677. (1016 aa)    
Predicted Functional Partners:
AEE51013.1
Arylsulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: sli:Slin_4996 sulfatase; PFAM: Sulfatase; PRIAM: Arylsulfatase; SPTR: Sulfatase; IMG reference gene:2504772532; PFAM: Sulfatase.
  
 
  0.935
AEE51150.1
COGs: COG4409 Neuraminidase (sialidase); KEGG: phe:Phep_3253 glycosyl hydrolase BNR repeat-containing protein; SPTR: Glycosyl hydrolase BNR repeat-containing protein; IMG reference gene:2504772671; PFAM: BNR/Asp-box repeat.
 
  
 
0.927
AEE50996.1
Alpha-galactosidase; InterPro IPR013222:IPR019599:IPR000111; KEGG: phe:Phep_2887 alpha-galactosidase; PFAM: Glycosyl hydrolase family 98, putative carbohydrate-binding module; Alpha-galactosidase, NEW1 domain; Glycoside hydrolase, clan GH-D; PRIAM: Alpha-galactosidase; SMART: Glycosyl hydrolase family 98, putative carbohydrate-binding module; SPTR: Alpha-galactosidase; IMG reference gene:2504772514; PFAM: NPCBM/NEW2 domain; Melibiase; He_PIG associated, NEW1 domain of bacterial glycohydrolase.
 
  
  0.918
AEE50998.1
Alpha-galactosidase; InterPro IPR013222:IPR019599:IPR008009:IPR000111; KEGG: phe:Phep_2885 alpha-galactosidase; PFAM: Putative Ig; Alpha-galactosidase, NEW1 domain; Glycosyl hydrolase family 98, putative carbohydrate-binding module; Glycoside hydrolase, clan GH-D; PRIAM: Alpha-galactosidase; SMART: Glycosyl hydrolase family 98, putative carbohydrate-binding module; SPTR: Alpha-galactosidase; IMG reference gene:2504772516; PFAM: NPCBM/NEW2 domain; Melibiase; He_PIG associated, NEW1 domain of bacterial glycohydrolase; Putative Ig domain.
 
  
  0.918
AEE54089.1
Lipolytic protein G-D-S-L family; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: sli:Slin_3977 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family; IMG reference gene:2504775676; PFAM: GDSL-like Lipase/Acylhydrolase.
 
     0.862
AEE51607.1
KEGG: dfe:Dfer_1597 putative alpha-galactosidase precursor; SPTR: Putative alpha-galactosidase; IMG reference gene:2504773136.
 
     0.730
AEE51601.1
KEGG: sli:Slin_4556 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773130; PFAM: Alpha-L-fucosidase.
  
 0.709
AEE51152.1
N-acetylneuraminate lyase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220; KEGG: sli:Slin_2625 dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase; PRIAM: N-acetylneuraminate lyase; SPTR: Dihydrodipicolinate synthetase; IMG reference gene:2504772673; PFAM: Dihydrodipicolinate synthetase family.
 
   
 0.690
AEE53695.1
InterPro IPR012944; KEGG: dfe:Dfer_4183 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504775270; PFAM: SusD family.
  
 
   0.594
AEE51965.1
KEGG: dfe:Dfer_5678 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773505.
  
     0.582
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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