STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLZ57176.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa)    
Predicted Functional Partners:
OLZ49163.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
OLZ46533.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.721
OLZ46220.1
Peptidase M38; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.605
pfp
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
       0.498
OLZ55646.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.494
OLZ43084.1
2-oxoacid ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.464
OLZ57175.1
TIGR02453 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.442
OLZ47507.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.431
OLZ53591.1
Zn-dependent exopeptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.427
OLZ43216.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.414
Your Current Organism:
Amycolatopsis coloradensis
NCBI taxonomy Id: 76021
Other names: A. coloradensis, ATCC 53629, Amycolatopsis coloradoensis, DSM 44225, IFO 15804, IMSNU 22096, JCM 9869, NBRC 15804, NRRL 3218
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