STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLZ54598.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)    
Predicted Functional Partners:
OLZ54596.1
Pyranose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.907
OLZ54593.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.859
OLZ54592.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.809
OLZ54597.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.791
OLZ54599.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.791
OLZ54772.1
UDP-phosphate galactose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.789
OLZ54601.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.784
OLZ54600.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
0.780
OLZ54595.1
L-alanine--N-amidino-3-keto-scyllo-inosamine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
 
    0.777
OLZ54594.1
2-epi-5-epi-valiolone synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.758
Your Current Organism:
Amycolatopsis coloradensis
NCBI taxonomy Id: 76021
Other names: A. coloradensis, ATCC 53629, Amycolatopsis coloradoensis, DSM 44225, IFO 15804, IMSNU 22096, JCM 9869, NBRC 15804, NRRL 3218
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.