STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLZ53181.1Glucan 1,4-alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (722 aa)    
Predicted Functional Partners:
OLZ50597.1
Glycogen phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.878
OLZ45264.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.874
OLZ50636.1
1,4-alpha-glucan branching protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 57 family.
    
  0.869
OLZ54427.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.754
OLZ57436.1
Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.716
OLZ55727.1
Trehalose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.639
OLZ55204.1
Trehalose-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.554
OLZ44093.1
Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.528
OLZ57389.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.514
OLZ46137.1
Lyase precursor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.511
Your Current Organism:
Amycolatopsis coloradensis
NCBI taxonomy Id: 76021
Other names: A. coloradensis, ATCC 53629, Amycolatopsis coloradoensis, DSM 44225, IFO 15804, IMSNU 22096, JCM 9869, NBRC 15804, NRRL 3218
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.