STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLZ53269.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa)    
Predicted Functional Partners:
OLZ53268.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.963
OLZ53270.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.839
OLZ50997.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.822
OLZ53786.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.819
OLZ51493.1
Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.814
OLZ54749.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.813
OLZ43496.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.813
OLZ55620.1
Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.811
OLZ51357.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.811
OLZ48458.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.806
Your Current Organism:
Amycolatopsis coloradensis
NCBI taxonomy Id: 76021
Other names: A. coloradensis, ATCC 53629, Amycolatopsis coloradoensis, DSM 44225, IFO 15804, IMSNU 22096, JCM 9869, NBRC 15804, NRRL 3218
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.