STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLZ53478.1NAD-dependent epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)    
Predicted Functional Partners:
OLZ47697.1
GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.602
OLZ55726.1
ATP-dependent endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.576
OLZ45413.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.576
OLZ53813.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.529
OLZ43743.1
TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.499
arcA
Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.497
OLZ46037.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.469
OLZ57311.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.452
OLZ55319.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.452
OLZ55384.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.452
Your Current Organism:
Amycolatopsis coloradensis
NCBI taxonomy Id: 76021
Other names: A. coloradensis, ATCC 53629, Amycolatopsis coloradoensis, DSM 44225, IFO 15804, IMSNU 22096, JCM 9869, NBRC 15804, NRRL 3218
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.