STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLZ50100.1SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)    
Predicted Functional Partners:
OLZ50099.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.795
OLZ44506.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.744
OLZ46566.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.706
OLZ52457.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.691
OLZ44518.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.674
OLZ44581.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.666
OLZ53634.1
Sarcosine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.
     
 0.641
OLZ43077.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.619
OLZ50102.1
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.593
gcvP
Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.573
Your Current Organism:
Amycolatopsis coloradensis
NCBI taxonomy Id: 76021
Other names: A. coloradensis, ATCC 53629, Amycolatopsis coloradoensis, DSM 44225, IFO 15804, IMSNU 22096, JCM 9869, NBRC 15804, NRRL 3218
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.