STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLZ49445.1Peptidase M4 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (712 aa)    
Predicted Functional Partners:
OLZ49264.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.912
OLZ56465.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.749
OLZ56466.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.749
OLZ53674.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
  
 
0.749
OLZ50044.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
  
 
0.749
OLZ43020.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.749
OLZ55588.1
Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.728
OLZ52586.1
Chitin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.674
OLZ53365.1
TIGR02677 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.662
OLZ47465.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.636
Your Current Organism:
Amycolatopsis coloradensis
NCBI taxonomy Id: 76021
Other names: A. coloradensis, ATCC 53629, Amycolatopsis coloradoensis, DSM 44225, IFO 15804, IMSNU 22096, JCM 9869, NBRC 15804, NRRL 3218
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.