STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLZ48341.1Phospholipase C, phosphocholine-specific; Derived by automated computational analysis using gene prediction method: Protein Homology. (691 aa)    
Predicted Functional Partners:
OLZ47794.1
Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.919
OLZ44857.1
Glycerophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.668
OLZ51474.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.641
OLZ48479.1
Bleomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.603
OLZ48342.1
DUF948 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
OLZ48343.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
OLZ50074.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.498
OLZ48340.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.498
OLZ43400.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.498
OLZ45662.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.408
Your Current Organism:
Amycolatopsis coloradensis
NCBI taxonomy Id: 76021
Other names: A. coloradensis, ATCC 53629, Amycolatopsis coloradoensis, DSM 44225, IFO 15804, IMSNU 22096, JCM 9869, NBRC 15804, NRRL 3218
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.