STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLZ46583.1Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. (399 aa)    
Predicted Functional Partners:
BS329_21385
Hypothetical protein; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.811
OLZ49011.1
Type VII secretion-associated serine protease mycosin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
  
     0.761
OLZ45536.1
Peptidase S8 and S53 subtilisin kexin sedolisin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.758
OLZ46171.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.592
OLZ55433.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.567
OLZ50723.1
Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.567
OLZ49013.1
Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.567
OLZ45460.1
Secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.567
BS329_39025
Protein tyrosine phosphatase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.567
OLZ46408.1
Histidine phosphatase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.539
Your Current Organism:
Amycolatopsis coloradensis
NCBI taxonomy Id: 76021
Other names: A. coloradensis, ATCC 53629, Amycolatopsis coloradoensis, DSM 44225, IFO 15804, IMSNU 22096, JCM 9869, NBRC 15804, NRRL 3218
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