STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG13659.1Serine--glyoxylate transaminase; KEGG: pth:PTH_0011 serine-pyruvate aminotransferase/aspartate aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase. (383 aa)    
Predicted Functional Partners:
AEG13660.1
TIGRFAM: D-3-phosphoglycerate dehydrogenase; KEGG: pth:PTH_0012 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; Amino acid-binding ACT.
 
  
 0.946
AEG15495.1
Formiminotransferase-cyclodeaminase; PFAM: Cyclodeaminase/cyclohydrolase; KEGG: dae:Dtox_2588 formiminotransferase-cyclodeaminase.
 
  
 0.733
AEG14717.1
PFAM: Peptidase S1/S6, chymotrypsin/Hap; KEGG: dae:Dtox_0986 HtrA2 peptidase; SMART: PDZ/DHR/GLGF.
    
  0.731
AEG16670.1
Isopentenyl-diphosphate Delta-isomerase; KEGG: mta:Moth_1328 isopentenyl pyrophosphate isomerase; manually curated.
 
 0.712
AEG15581.1
KEGG: drm:Dred_0769 alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1.
  
  
 0.706
AEG16204.1
PFAM: FAD dependent oxidoreductase; KEGG: drm:Dred_1730 FAD dependent oxidoreductase.
  
 
 0.685
AEG15273.1
Phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; TIGRFAM: Phosphoribosylglycinamide synthetase; HAMAP: Phosphoribosylglycinamide synthetase; KEGG: pth:PTH_2540 phosphoribosylamine-glycine ligase.
  
  
 0.684
AEG16315.1
(S)-2-hydroxy-acid oxidase; KEGG: adg:Adeg_1075 FMN-dependent alpha-hydroxy acid dehydrogenase; PFAM: FMN-dependent dehydrogenase.
  
 0.671
AEG13661.1
PFAM: Phosphoglycerate mutase; KEGG: phosphoglycerate mutase.
  
  
 0.670
AEG16482.1
TIGRFAM: 4-aminobutyrate aminotransferase, bacterial; KEGG: pth:PTH_1185 4-aminobutyrate aminotransferase and related aminotransferases; PFAM: Aminotransferase class-III.
  
 
 0.618
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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