STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG13661.1PFAM: Phosphoglycerate mutase; KEGG: phosphoglycerate mutase. (214 aa)    
Predicted Functional Partners:
AEG13660.1
TIGRFAM: D-3-phosphoglycerate dehydrogenase; KEGG: pth:PTH_0012 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; Amino acid-binding ACT.
  
  
 0.725
AEG15902.1
TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; HAMAP: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; KEGG: dae:Dtox_3090 cobalamin 5'-phosphate synthase; PFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase.
 
  
 0.685
AEG13659.1
Serine--glyoxylate transaminase; KEGG: pth:PTH_0011 serine-pyruvate aminotransferase/aspartate aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase.
  
  
 0.670
AEG14346.1
PFAM: Ribonuclease H; KEGG: tai:Taci_0179 ribonuclease H.
 
  
 0.631
AEG15905.1
TIGRFAM: Cobyric acid synthase CobQ; HAMAP: Cobyric acid synthase CobQ; KEGG: dae:Dtox_3093 cobyric acid synthase; PFAM: CobB/CobQ-like glutamine amidotransferase; Cobyrinic acid a,c-diamide synthase.
  
  
 0.626
AEG15045.1
precorrin-3B C17-methyltransferase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core; KEGG: dae:Dtox_1296 precorrin-3B C17-methyltransferase; PFAM: Tetrapyrrole methylase.
  
  
 0.575
AEG13662.1
PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase; KEGG: pth:PTH_0013 seryl-tRNA synthetase.
       0.565
AEG14061.1
RNP-1 like RNA-binding protein; KEGG: pth:PTH_0836 hypothetical protein; PFAM: RNA recognition motif, RNP-1; SMART: RNA recognition motif, RNP-1.
     
 0.556
AEG15101.1
TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; KEGG: pth:PTH_0973 uroporphyrinogen-III methylase and uroporphyrinogen-III synthase; PFAM: Tetrapyrrole methylase; Tetrapyrrole biosynthesis, uroporphyrinogen III synthase.
     
 0.508
AEG16122.1
KEGG: drm:Dred_2459 hypothetical protein; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3.
  
  
 0.485
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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