STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG13684.1KEGG: drm:Dred_0057 hypothetical protein. (74 aa)    
Predicted Functional Partners:
AEG13686.1
PFAM: Thymidylate kinase-like; TIGRFAM: Thymidylate kinase; HAMAP: Thymidylate kinase; KEGG: pth:PTH_0062 thymidylate kinase.
       0.530
AEG13687.1
TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: pth:PTH_0063 DNA polymerase III, gamma/tau subunits.
       0.530
AEG13685.1
KEGG: pth:PTH_0061 arginine/lysine/ornithine decarboxylases; PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, C-terminal.
       0.529
AEG13688.1
PSP1 domain protein; PFAM: PSP1, C-terminal; KEGG: pth:PTH_0064 hypothetical protein.
       0.456
AEG13690.1
TIGRFAM: Uncharacterised protein family UPF0011; HAMAP: Ribosomal RNA small subunit methyltransferase I; KEGG: pth:PTH_0066 methyltransferase; PFAM: Tetrapyrrole methylase.
       0.443
AEG13689.1
Protein of unknown function DUF972; KEGG: pth:PTH_0065 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF972.
       0.441
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.