STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG13738.1Hypothetical protein. (53 aa)    
Predicted Functional Partners:
AEG13739.1
KEGG: slp:Slip_1963 hypothetical protein.
       0.773
AEG13740.1
PFAM: PilT protein, N-terminal; KEGG: slp:Slip_1962 PilT protein domain protein.
       0.773
AEG13737.1
PFAM: Protein of unknown function DUF820; KEGG: dsy:DSY2029 hypothetical protein.
       0.639
AEG13741.1
KEGG: bts:Btus_2857 ATPase (AAA+ superfamily)-like protein.
       0.498
AEG13742.1
KEGG: bts:Btus_2856 hypothetical protein.
       0.475
AEG13743.1
PFAM: Protein of unknown function DUF1156; DNA methylase N-4/N-6; KEGG: bts:Btus_2855 protein of unknown function DUF1156.
       0.448
AEG13736.1
KEGG: dau:Daud_1835 hypothetical protein.
       0.434
AEG13744.1
KEGG: bts:Btus_2854 helicase domain protein; PFAM: DNA/RNA helicase, C-terminal; SNF2-related; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal.
       0.432
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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