STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG13750.1KEGG: aco:Amico_0303 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD. (406 aa)    
Predicted Functional Partners:
AEG13749.1
Acriflavin resistance protein; KEGG: dde:Dde_0965 AcrB/AcrD/AcrF family protein; manually curated; PFAM: Acriflavin resistance protein.
 
 0.986
AEG16876.1
PFAM: Outer membrane efflux protein; KEGG: slp:Slip_1958 outer membrane efflux protein.
 
 0.980
AEG16867.1
PFAM: Acriflavin resistance protein; KEGG: dau:Daud_2099 acriflavin resistance protein.
 
 0.939
AEG16285.1
PFAM: Acriflavin resistance protein; KEGG: adg:Adeg_1907 acriflavin resistance protein.
 
 0.935
AEG16812.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: pth:PTH_0039 peptide ABC transporter permease.
 
 
 0.909
AEG16669.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: adg:Adeg_1983 protein of unknown function DUF214.
 
 
 0.906
AEG16668.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: adg:Adeg_1984 ABC transporter related protein; SMART: ATPase, AAA+ type, core.
 
 
 0.860
AEG16813.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pth:PTH_1457 peptide ABC transporter ATPase; SMART: ATPase, AAA+ type, core.
 
 
 0.860
AEG16811.1
KEGG: dau:Daud_2120 outer membrane protein-like protein.
 
 
 0.813
AEG13748.1
KEGG: hypothetical protein.
 
     0.713
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.