STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG13758.1PFAM: Nucleoside recognition; KEGG: mac:MA3910 hypothetical protein. (319 aa)    
Predicted Functional Partners:
AEG14183.1
KEGG: gpb:HDN1F_29030 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; NERD; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain.
  
     0.754
AEG16884.1
KEGG: adg:Adeg_0154 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.
  
     0.753
AEG14185.1
SMART: ATPase, AAA+ type, core; KEGG: has:Halsa_0223 AAA ATPase.
  
     0.734
AEG14136.1
Resolvase domain protein; PFAM: Resolvase, N-terminal; Recombinase; KEGG: pth:PTH_0693 site-specific recombinases.
  
    0.730
AEG14187.1
KEGG: elm:ELI_2784 hypothetical protein.
  
     0.718
AEG14181.1
KEGG: ava:Ava_B0311 hypothetical protein.
  
     0.695
AEG15539.1
PFAM: O-antigen ligase-related; KEGG: dae:Dtox_3371 O-antigen polymerase.
  
     0.671
AEG13757.1
PFAM: GCN5-related N-acetyltransferase; KEGG: mru:mru_1712 acetyltransferase GNAT family.
       0.651
AEG14419.1
TIGRFAM: Transposase, IS605 OrfB, C-terminal; KEGG: chy:CHY_0382 ISChy7, transposase.
  
     0.640
AEG15721.1
KEGG: tma:TM0649 hypothetical protein.
  
     0.631
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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