STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG13797.1PFAM: GHMP kinase; GHMP kinase, C-terminal; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: pth:PTH_0096 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase. (294 aa)    
Predicted Functional Partners:
AEG16640.1
TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; KEGG: tjr:TherJR_0254 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core.
 
 
 0.990
AEG16641.1
TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; HAMAP: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; KEGG: pth:PTH_0289 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase.
 
  
 0.990
AEG13715.1
KEGG: pth:PTH_0080 dimethyladenosine transferase; PFAM: Ribosomal RNA adenine methylase transferase; TIGRFAM: Ribosomal RNA adenine dimethylase; HAMAP: Ribosomal RNA adenine dimethylase; SMART: Ribosomal RNA adenine methylase transferase, N-terminal.
  
 0.969
AEG16078.1
PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: dae:Dtox_3204 1-deoxy-D-xylulose 5-phosphate reductoisomerase.
 
   
 0.894
AEG16076.1
TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; KEGG: drm:Dred_1968 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type.
 
   
 0.891
AEG13798.1
KEGG: pth:PTH_0097 transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR.
    
 0.849
AEG13714.1
PFAM: 3D; G5; Protein of unknown function DUF348; KEGG: adg:Adeg_2112 3D domain protein.
     
 0.803
AEG15489.1
1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; TIGRFAM: Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; KEGG: pth:PTH_1196 deoxyxylulose-5-phosphate synthase.
 
   
 0.799
AEG13796.1
TIGRFAM: Cyanophycin synthetase; KEGG: tjr:TherJR_0126 cyanophycin synthetase; PFAM: Mur ligase, central; ATP-grasp fold, RimK-type; Mur ligase, C-terminal.
  
    0.796
AEG15407.1
KEGG: dae:Dtox_2102 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; manually curated; TIGRFAM: LytB protein; PFAM: LytB protein; Ribosomal protein S1, RNA binding domain; HAMAP: LytB protein.
  
  
 0.709
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.