STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG13820.1KEGG: tjr:TherJR_2292 hypothetical protein. (99 aa)    
Predicted Functional Partners:
AEG13821.1
PFAM: Protein of unknown function DUF1814; KEGG: dau:Daud_2111 hypothetical protein.
       0.797
AEG13822.1
TIGRFAM: Acetoacetyl-CoA synthase; KEGG: dal:Dalk_3789 acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase/ligase.
       0.504
AEG13819.1
TIGRFAM: Transcription-repair coupling factor; PFAM: Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Transcription-repair-coupling factor; KEGG: drm:Dred_0111 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal.
       0.405
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.