STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG13897.1Helix-turn-helix domain protein; Manually curated; PFAM: Helix-turn-helix type 3; KEGG: mta:Moth_1714 XRE family transcriptional regulator; SMART: Helix-turn-helix type 3. (83 aa)    
Predicted Functional Partners:
AEG13896.1
Helix-turn-helix domain protein; KEGG: mta:Moth_1715 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
 
   
 0.839
AEG15614.1
Helix-turn-helix domain protein; KEGG: mta:Moth_1715 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
 
   
 0.705
AEG16855.1
KEGG: drm:Dred_3104 hypothetical protein.
  
     0.687
AEG16023.1
Helix-turn-helix domain protein; KEGG: mta:Moth_0281 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
 
   
 0.658
AEG16026.1
Helix-turn-helix domain protein; KEGG: pth:PTH_0164 transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
 
   
 0.606
AEG16028.1
Helix-turn-helix domain protein; KEGG: mta:Moth_0281 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
 
   
 0.604
AEG15962.1
KEGG: adg:Adeg_0813 hypothetical protein.
  
     0.584
AEG16885.1
KEGG: mta:Moth_2072 hypothetical protein.
  
     0.561
AEG13898.1
KEGG: drm:Dred_2998 S-layer domain-containing protein; PFAM: Bacterial Ig-like, group 2; S-layer homology region; Immunoglobulin; SMART: Bacterial Ig-like, group 2.
  
    0.531
AEG16873.1
PFAM: Transposase (putative), YhgA-like; KEGG: mta:Moth_2074 hypothetical protein.
  
     0.516
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.