STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG13995.1PFAM: Asp/Glu/hydantoin racemase; TIGRFAM: Glutamate racemase; HAMAP: Glutamate racemase; KEGG: pth:PTH_0787 glutamate racemase. (268 aa)    
Predicted Functional Partners:
AEG14737.1
TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; KEGG: dau:Daud_1438 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; PFAM: Mur ligase, central; FAD dependent oxidoreductase; Mur ligase, C-terminal.
 
  
 0.983
AEG14000.1
Nucleoside-triphosphatase rdgB; PFAM: Ham1-like protein; TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase rdgB; KEGG: pth:PTH_0792 nucleoside-triphosphatase.
 
    0.950
AEG15114.1
Phosphoribosylformylglycinamidine synthase 1; PFAM: CobB/CobQ-like glutamine amidotransferase; TIGRFAM: Phosphoribosylformylglycinamidine synthase I; HAMAP: Phosphoribosylformylglycinamidine synthase 1; KEGG: pth:PTH_1430 phosphoribosylformylglycinamidine synthase domain-containing protein.
     
  0.900
AEG14739.1
TIGRFAM: N-acetylglucosaminyltransferase, MurG; HAMAP: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: pth:PTH_1861 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: Glycosyl transferase, family 28; Glycosyl transferase, family 28, C-terminal.
 
  
 0.710
AEG16593.1
PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: tjr:TherJR_1176 D-alanine/D-alanine ligase.
 
  
 0.706
AEG14740.1
PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; KEGG: pth:PTH_1860 UDP-N-acetylmuramate--L-alanine ligase.
 
   
 0.704
AEG13994.1
N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Copper amine oxidase-like, N-terminal; SH3, type 3; KEGG: pth:PTH_0786 hypothetical protein; SMART: Cell wall hydrolase/autolysin, catalytic; Bacterial SH3-like region.
     
 0.686
AEG14741.1
PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: pth:PTH_1859 UDP-N-acetylenolpyruvoylglucosamine reductase.
  
  
 0.661
AEG13996.1
PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; KEGG: pth:PTH_0788 benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit.
       0.649
AEG13796.1
TIGRFAM: Cyanophycin synthetase; KEGG: tjr:TherJR_0126 cyanophycin synthetase; PFAM: Mur ligase, central; ATP-grasp fold, RimK-type; Mur ligase, C-terminal.
  
  
 0.642
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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