STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG14079.1TIGRFAM: CRISPR-associated HD domain; Helicase Cas3, CRISPR-associated, core; KEGG: adg:Adeg_0975 CRISPR-associated helicase Cas3. (829 aa)    
Predicted Functional Partners:
AEG14078.1
TIGRFAM: CRISPR-associated protein Cas5; KEGG: adg:Adeg_0974 CRISPR-associated protein Cas5, Hmari subtype.
 
 
 0.977
AEG14077.1
KEGG: adg:Adeg_0973 CRISPR-associated protein, Csh2 family; TIGRFAM: CRISPR-associated protein Csh2; CRISPR-associated protein TM1801; PFAM: CRISPR-associated protein TM1801.
 
  
 0.957
AEG14080.1
KEGG: dau:Daud_1812 CRISPR-associated Cas4 family protein; TIGRFAM: CRISPR-associated protein Cas4; PFAM: CRISPR-associated protein Cas4.
 
  
 0.942
AEG14076.1
KEGG: adg:Adeg_0972 CRISPR-associated protein, Csh1 family; TIGRFAM: CRISPR-associated protein Csh1, C-terminal; CRISPR-associated protein TM1802; PFAM: CRISPR-associated protein TM1802.
 
     0.938
AEG14081.1
KEGG: dau:Daud_1811 CRISPR-associated Cas1 family protein; TIGRFAM: CRISPR-associated protein Cas1, HMARI/TNEAP subtype; CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1.
 
  
 0.903
AEG14082.1
CRISPR-associated protein Cas2; TIGRFAM: Protein of unknown function DUF196; KEGG: tte:TTE2657 hypothetical protein.
 
  
 0.856
AEG14220.1
CRISPR-associated protein Cas2; TIGRFAM: Protein of unknown function DUF196; KEGG: mta:Moth_1726 hypothetical protein.
 
  
 0.823
AEG14219.1
KEGG: mta:Moth_1727 CRISPR-associated Cas1 family protein; TIGRFAM: CRISPR-associated protein Cas1, HMARI/TNEAP subtype; CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1.
 
  
 0.811
AEG16472.1
KEGG: adg:Adeg_1767 CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1.
 
  
 0.796
AEG14218.1
KEGG: mta:Moth_1728 CRISPR-associated Cas4 family protein; TIGRFAM: CRISPR-associated protein Cas4; PFAM: CRISPR-associated protein Cas4.
 
  
 0.761
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.