STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG14212.1TIGRFAM: HDIG; PFAM: Transcriptional regulator, histidine kinase sensor, N-terminal; GAF; Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: mta:Moth_2150 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region; GAF. (716 aa)    
Predicted Functional Partners:
AEG16405.1
TIGRFAM: Diguanylate cyclase, predicted; PAS; HDIG; PFAM: Diguanylate cyclase, predicted; PAS fold-4; Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: chy:CHY_1875 sensory box protein; SMART: Diguanylate cyclase, predicted; PAS; Metal-dependent phosphohydrolase, HD region.
 
 
0.897
AEG16698.1
Diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: CHASE4; HAMP linker domain; PAS fold-3; PAS fold-4; Diguanylate cyclase, predicted; Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: drm:Dred_1552 diguanylate cyclase with PAS/PAC sensor; SMART: Diguanylate cyclase, predicted; PAS; Metal-dependent phosphohydrolase, HD region.
 
 
0.895
AEG16988.1
TIGRFAM: Diguanylate cyclase, predicted; PAS; HDIG; PFAM: Diguanylate cyclase, predicted; PAS fold-4; Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: chy:CHY_1875 sensory box protein; SMART: Diguanylate cyclase, predicted; PAS; Metal-dependent phosphohydrolase, HD region.
 
 
0.893
AEG16089.1
TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; KEGG: pth:PTH_1422 hypothetical protein; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS.
  
 
 0.888
AEG16759.1
SMART: Diguanylate cyclase, predicted; TIGRFAM: Diguanylate cyclase, predicted; KEGG: sta:STHERM_c00770 hypothetical protein; PFAM: Diguanylate cyclase, predicted.
 
 0.869
AEG14332.1
SMART: Diguanylate cyclase, predicted; TIGRFAM: Diguanylate cyclase, predicted; KEGG: dau:Daud_0690 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted.
 
 0.843
AEG16706.1
Diguanylate cyclase/phosphodiesterase with CBS domains; TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Cystathionine beta-synthase, core; Diguanylate cyclase, predicted; KEGG: dae:Dtox_1949 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted.
  
 
 0.809
AEG15712.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; HAMP linker domain; KEGG: pca:Pcar_2297 sensor histidine kinase/GGDEF domain-containing protein; SMART: Diguanylate cyclase, predicted.
 
 
 0.804
AEG16457.1
KEGG: pth:PTH_2640 signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF.
  
  
 0.756
AEG15591.1
KEGG: tye:THEYE_A0182 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
  
  
 0.734
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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