STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG14226.1KEGG: pth:PTH_0481 2-keto-4-pentenoate hydratase; PFAM: Fumarylacetoacetase, C-terminal-like. (260 aa)    
Predicted Functional Partners:
AEG14228.1
4-hydroxy-2-oxovalerate aldolase; PFAM: Pyruvate carboxyltransferase; DmpG-like communication; TIGRFAM: 4-hydroxy-2-oxovalerate aldolase; HAMAP: 4-hydroxy-2-oxovalerate aldolase; KEGG: pth:PTH_0483 4-hydroxy-2-ketovalerate aldolase.
 
 
 0.993
AEG14227.1
PFAM: Acetaldehyde dehydrogenase, C-terminal; Semialdehyde dehydrogenase, NAD-binding; TIGRFAM: Acetaldehyde dehydrogenase; HAMAP: Acetaldehyde dehydrogenase; KEGG: pth:PTH_0482 acetaldehyde dehydrogenase.
  
 0.985
AEG14223.1
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; BFD-like [2Fe-2S]-binding region; KEGG: pth:PTH_0478 hypothetical protein.
 
     0.690
AEG14225.1
PFAM: Quinolinate phosphoribosyl transferase; KEGG: pth:PTH_0480 nicotinate-nucleotide pyrophosphorylase.
 
     0.688
AEG14224.1
KEGG: pth:PTH_0479 hypothetical protein.
       0.600
AEG14234.1
PFAM: Molybdopterin binding; KEGG: pth:PTH_0485 hypothetical protein.
 
     0.582
AEG15881.1
KEGG: dae:Dtox_0905 prephenate dehydratase; PFAM: Prephenate dehydratase; Amino acid-binding ACT; Chorismate mutase, type II.
      
 0.403
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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