STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG14403.1PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: hel:HELO_2938 TRAP transporter small transmembrane protein. (169 aa)    
Predicted Functional Partners:
AEG14404.1
KEGG: rpd:RPD_0611 TRAP dicarboxylate transporter-DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
 
 
 0.941
AEG14405.1
PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: rpt:Rpal_5036 TRAP dicarboxylate transporter-DctP subunit.
 
  
 0.819
AEG16371.1
PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: tjr:TherJR_2415 extracellular solute-binding protein, family 7.
 
  
 0.783
AEG16369.1
KEGG: tjr:TherJR_2413 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
 
 
 0.761
AEG16370.1
KEGG: tjr:TherJR_2414 tripartite ATP-independent periplasmic transporter DctQ component.
  
     0.703
AEG13812.1
KEGG: dat:HRM2_42860 DctM9; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
  
 
 0.589
AEG14199.1
KEGG: aco:Amico_0090 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
  
 
 0.589
AEG14929.1
KEGG: chy:CHY_1364 TRAP dicarboxylate transporter subunit DctM; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
  
 
 0.589
AEG16619.1
KEGG: dhd:Dhaf_1069 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
  
 
 0.589
AEG13832.1
KEGG: drm:Dred_1330 formate dehydrogenase; PFAM: Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal.
  
     0.525
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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