STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG14435.1PFAM: Peptidase M23; KEGG: adg:Adeg_0737 peptidase M23. (597 aa)    
Predicted Functional Partners:
AEG15323.1
CheC, inhibitor of MCP methylation / FliN fusion protein; KEGG: drm:Dred_2380 flagellar motor switch protein; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA); CheC-like protein.
   
   0.738
AEG14436.1
KEGG: drm:Dred_0936 hypothetical protein.
  
   0.682
AEG14434.1
Hypothetical protein.
       0.628
AEG14433.1
KEGG: adg:Adeg_0719 ParB domain protein nuclease; PFAM: ParB-like nuclease; SMART: ParB-like nuclease.
       0.623
AEG14437.1
PFAM: Type II secretion system protein E; KEGG: mta:Moth_0324 type II secretion system protein E.
       0.618
AEG14438.1
PFAM: Type II secretion system F domain; KEGG: drm:Dred_0945 hypothetical protein.
       0.593
AEG14425.1
KEGG: drm:Dred_0931 hypothetical protein.
 
     0.590
AEG14439.1
KEGG: mta:Moth_0326 hypothetical protein.
       0.545
AEG15039.1
TIGRFAM: Penicillin-binding protein 1A; KEGG: dae:Dtox_1300 penicillin-binding protein, 1A family; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase.
  
   
 0.534
AEG14267.1
TIGRFAM: Penicillin-binding protein 1A; KEGG: pth:PTH_1935 membrane carboxypeptidase; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase.
 
   
 0.526
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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