STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG14488.1KEGG: adg:Adeg_0813 hypothetical protein. (357 aa)    
Predicted Functional Partners:
AEG16182.1
SMART: Heat shock protein DnaJ, N-terminal; TIGRFAM: Chaperone DnaJ; KEGG: pth:PTH_0879 DnaJ-class molecular chaperone; HAMAP: Chaperone protein dnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich region.
  
 0.985
AEG16184.1
Protein grpE; KEGG: pth:PTH_0877 molecular chaperone GrpE; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor.
  
 
 0.960
AEG16675.1
ATPase AAA-2 domain protein; KEGG: pth:PTH_0283 ATPase with chaperone activity, ATP-binding subunit; PFAM: ATPase associated with various cellular activities, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core.
  
 
 0.960
AEG17015.1
PFAM: Glycosyl transferase, family 2; Tetratricopeptide TPR-1; KEGG: pth:PTH_1119 hypothetical protein.
  
 0.944
AEG15867.1
KEGG: adg:Adeg_1345 helicase domain protein; PFAM: DNA/RNA helicase, C-terminal; SNF2-related; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal.
  
 
 0.911
rplP
50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.883
AEG15007.1
PFAM: Tetratricopeptide TPR-1; KEGG: drm:Dred_1753 TPR repeat-containing protein.
 
 0.875
AEG16185.1
PFAM: Chaperonin Cpn60/TCP-1; KEGG: pth:PTH_0876 chaperonin GroEL.
  
 
 0.852
AEG16411.1
TIGRFAM: Chaperonin Cpn60; HAMAP: 60 kDa chaperonin; KEGG: pth:PTH_2605 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1.
  
 
 0.852
AEG15319.1
KEGG: pth:PTH_2583 hypothetical protein.
  
 0.851
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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