STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG14727.1PFAM: Patatin; KEGG: drm:Dred_0664 patatin. (305 aa)    
Predicted Functional Partners:
AEG16252.1
KEGG: pth:PTH_0857 hydrolase; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein.
     
 0.638
AEG14728.1
KEGG: dae:Dtox_1037 hypothetical protein.
  
    0.601
AEG14494.1
PFAM: TRAG protein; KEGG: dau:Daud_0815 TraG family protein.
    
   0.579
AEG14559.1
Hypothetical protein; KEGG: type IV secretory pathway VirD4 components-like protein.
    
   0.579
AEG15181.1
PFAM: TRAG protein; KEGG: pth:PTH_2488 type IV secretory pathway, VirD4 components.
    
   0.579
AEG15936.1
PFAM: TRAG protein; KEGG: dae:Dtox_1405 TraG family protein.
    
   0.579
AEG14726.1
Hypothetical protein.
       0.555
AEG14729.1
KEGG: dau:Daud_1449 histidinol-phosphatase; TIGRFAM: Histidinol phosphate phosphatase, HisJ; PFAM: PHP, C-terminal.
     
 0.550
AEG14845.1
KEGG: pth:PTH_1749 hypothetical protein; TIGRFAM: Sporulation integral membrane protein YlbJ; PFAM: Nucleoside recognition.
 
     0.521
AEG15434.1
CBS domain containing protein; KEGG: drm:Dred_1131 polynucleotide adenylyltransferase region; PFAM: Cystathionine beta-synthase, core; Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; Polynucleotide adenylyltransferase region; SMART: Cystathionine beta-synthase, core.
       0.516
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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