STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG14873.1TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 1, core; KEGG: pth:PTH_1805 orotidine-5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase, core. (243 aa)    
Predicted Functional Partners:
AEG14875.1
PFAM: Phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyltransferase, Thermus type; HAMAP: Orotate phosphoribosyltransferase; KEGG: dae:Dtox_2348 orotate phosphoribosyltransferase.
  
 
 0.997
AEG14872.1
TIGRFAM: Dihydroorotate dehydrogenase, class 1, core; KEGG: dae:Dtox_2350 dihydroorotate dehydrogenase 1B; PFAM: Dihydroorotate dehydrogenase, class 1/ 2.
 
  
 0.988
pyrR
Bifunctional protein pyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.
  
 
 0.987
AEG14867.1
TIGRFAM: Dihydroorotase multifunctional complex type; KEGG: dae:Dtox_2354 dihydroorotase, multifunctional complex type; PFAM: Amidohydrolase 1.
 
  
 0.978
AEG14866.1
PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; HAMAP: Aspartate carbamoyltransferase; KEGG: pth:PTH_1812 aspartate carbamoyltransferase catalytic subunit.
  
  
 0.974
AEG14868.1
TIGRFAM: Carbamoyl phosphate synthase, small subunit; KEGG: pth:PTH_1810 carbamoylphosphate synthase small subunit; PFAM: Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal.
  
  
 0.968
AEG16085.1
KEGG: pth:PTH_1254 uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; PFAM: Aspartate/glutamate/uridylate kinase.
   
 
 0.932
AEG15000.1
TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; HAMAP: Multifunctional protein surE; KEGG: pth:PTH_1397 stationary phase survival protein SurE; PFAM: Survival protein SurE-like phosphatase/nucleotidase.
    
 0.921
AEG14871.1
PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; KEGG: dae:Dtox_2351 oxidoreductase FAD/NAD(P)-binding domain protein.
  
  
 0.882
AEG14299.1
PFAM: Xanthine/uracil/vitamin C permease; KEGG: pth:PTH_0868 xanthine/uracil permeases.
  
  
 0.857
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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