STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG14924.1Response regulator receiver and unknown domain protein; KEGG: pth:PTH_1350 response regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region. (228 aa)    
Predicted Functional Partners:
AEG14923.1
TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-4; KEGG: pth:PTH_1349 signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAS.
 0.998
AEG16102.1
KEGG: mta:Moth_1622 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like.
 
 
 0.908
AEG16309.1
KEGG: slp:Slip_0381 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like.
 
 
 0.889
AEG16611.1
PFAM: PAS fold; KEGG: pth:PTH_0844 transcriptional regulator.
 
 
 0.715
AEG14935.1
KEGG: pth:PTH_1492 coenzyme F420-reducing hydrogenase, beta subunit; PFAM: Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal; Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup.
 
     0.714
AEG16101.1
KEGG: mta:Moth_1623 hypothetical protein.
  
 
 0.632
AEG16345.1
KEGG: pth:PTH_2129 hypothetical protein.
  
 
 0.632
AEG14925.1
Manually curated; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; KEGG: pth:PTH_1351 TRAP-type C4-dicarboxylate transport system, periplasmic component; PFAM: Extracellular solute-binding protein, family 7, bacteria.
 
   
 0.610
AEG16089.1
TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; KEGG: pth:PTH_1422 hypothetical protein; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS.
 
   
 0.514
AEG16280.1
Two component transcriptional regulator, winged helix family; KEGG: dsy:DSY4081 hypothetical protein; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region.
  
   
 0.446
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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