STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG15135.1KEGG: dae:Dtox_1641 geranylgeranyl pyrophosphate synthase-like protein. (250 aa)    
Predicted Functional Partners:
AEG15132.1
KEGG: pth:PTH_1437 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase related; PFAM: UbiA prenyltransferase.
  
 
 0.956
AEG15105.1
KEGG: dae:Dtox_1248 trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase.
 
  
  0.952
AEG16081.1
Undecaprenyl pyrophosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Undecaprenyl pyrophosphate synthase; KEGG: pth:PTH_1257 undecaprenyl pyrophosphate synthase.
  
 
 0.922
AEG15491.1
PFAM: Polyprenyl synthetase; KEGG: pth:PTH_1194 geranylgeranyl pyrophosphate synthase.
     
  0.900
AEG15134.1
TIGRFAM: UbiE/COQ5 methyltransferase; HAMAP: UbiE/COQ5 methyltransferase; KEGG: pth:PTH_1439 ubiquinone/menaquinone biosynthesis methylase; PFAM: UbiE/COQ5 methyltransferase.
 
  
 0.850
AEG15133.1
Menaquinone biosynthesis decarboxylase, SCO4490 family; KEGG: pth:PTH_1438 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; TIGRFAM: menaquinone biosynthesis decarboxylase, SCO4490 family; Carboxylyase-related; PFAM: Carboxylyase-related.
 
   
 0.784
rnj
Ribocuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
  
    0.672
AEG15129.1
Menaquinone biosynthesis protein; KEGG: drm:Dred_2193 radical SAM domain-containing protein; TIGRFAM: menaquinone biosynthesis protein; FO synthase, subunit 2; PFAM: Radical SAM.
       0.631
AEG15131.1
TIGRFAM: putative menaquinone biosynthesis protein; FO synthase, subunit 2; PFAM: Radical SAM; KEGG: dae:Dtox_1643 radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
       0.617
AEG15130.1
PFAM: Protein of unknown function DUF178; KEGG: dae:Dtox_1644 protein of unknown function DUF178.
       0.612
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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