STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG15234.1PFAM: Tryptophan RNA-binding attenuator protein; KEGG: pth:PTH_2219 transcription attenuation protein MtrB. (78 aa)    
Predicted Functional Partners:
AEG15233.1
KEGG: pth:PTH_2218 hypothetical protein.
       0.741
AEG15229.1
TIGRFAM: Pyruvate kinase; KEGG: pth:PTH_2214 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; PEP-utilising enzyme, mobile region.
       0.705
AEG15235.1
DNA polymerase III, alpha subunit; SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: dae:Dtox_0809 DNA polymerase III DnaE; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type.
       0.662
AEG15249.1
KEGG: pth:PTH_2516 hypothetical protein.
  
     0.638
AEG15232.1
PFAM: Carboxyl transferase; TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; KEGG: pth:PTH_2217 acetyl-CoA carboxylase beta subunit.
       0.615
AEG15231.1
PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; KEGG: pth:PTH_2216 acetyl-CoA carboxylase alpha subunit.
       0.614
AEG15230.1
6-phosphofructokinase; PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase; HAMAP: 6-phosphofructokinase; KEGG: pth:PTH_2215 6-phosphofructokinase.
       0.554
AEG16053.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: dae:Dtox_3168 dipicolinate synthase subunit A.
  
     0.440
AEG16961.1
KEGG: pth:PTH_2850 transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type.
  
    0.425
AEG15528.1
KEGG: drm:Dred_3068 hypothetical protein.
  
     0.413
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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