STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG15322.1PFAM: O-antigen ligase-related; KEGG: pth:PTH_2583 hypothetical protein. (523 aa)    
Predicted Functional Partners:
AEG15319.1
KEGG: pth:PTH_2583 hypothetical protein.
   
 0.994
AEG15649.1
TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: toc:Toce_0501 undecaprenyl-phosphate galactose phosphotransferase, WbaP; PFAM: Bacterial sugar transferase; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase.
  
  
 0.889
AEG15318.1
PFAM: Lipopolysaccharide biosynthesis; KEGG: mtp:Mthe_0945 lipopolysaccharide biosynthesis.
  
  
 0.856
AEG15320.1
Hypothetical protein.
       0.773
AEG15321.1
KEGG: mta:Moth_0658 hypothetical protein.
       0.773
AEG15760.1
PFAM: Copper amine oxidase-like, N-terminal; KEGG: adg:Adeg_1643 copper amine oxidase domain protein.
 
     0.731
AEG15284.1
KEGG: pth:PTH_2553 hypothetical protein.
  
     0.730
AEG15777.1
S-layer domain-containing protein; KEGG: mta:Moth_1459 Ig-like, group 2; PFAM: S-layer homology region; Bacterial Ig-like, group 2; SMART: Bacterial Ig-like, group 2.
 
   
 0.717
AEG15807.1
PFAM: Copper amine oxidase-like, N-terminal; Tetratricopeptide TPR2; KEGG: bts:Btus_0241 copper amine oxidase domain protein.
 
     0.717
AEG14781.1
KEGG: pth:PTH_1320 suppresse phage shock protein A.
  
     0.715
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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